CDS
| Accession Number | TCMCG006C92711 |
| gbkey | CDS |
| Protein Id | XP_013677621.1 |
| Location | join(114462..114646,115010..115208,115275..115421,115503..115615,115696..115907,116297..116361,116453..116623,116748..116831,116920..117132,117283..117476,117576..117705,117773..117837,117906..118095) |
| Gene | LOC106382192 |
| GeneID | 106382192 |
| Organism | Brassica napus |
Protein
| Length | 655aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013822167.2 |
| Definition | histone deacetylase 5 isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | B |
| Description | histone deacetylase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01009 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11407
[VIEW IN KEGG] |
| EC |
3.5.1.98
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko05034
[VIEW IN KEGG] ko05165 [VIEW IN KEGG] ko05203 [VIEW IN KEGG] map05034 [VIEW IN KEGG] map05165 [VIEW IN KEGG] map05203 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGAACATGGCCGGAAAAACTTCAGTTAACGGTGAATCAAATGGGAAAGTACATCGAAAGGTGGGTCTTGTTTACGACGAGACGATGTGCAAACACGACACACCTCACGGCGAGGCTCACCCTGAGCGTCCCGATCGTATCAGAGTCATCTGGGAGAACCTTCAGCTCGCCGGAGTCACTCAAAGATGTGTGGTTCTTGGTGGTACCAAAGCAGAAGATGCGCATCTCCAACTGGTTCACACAAAGGACCATGTTAATCTAGTTAAGAGTAGCACAAACAAGAAAGATTATCAGAGTGACAGGGTTGCTTCGCTGGTGAATTCGATATATCTAAATGGAAGTACATCTGAAGCTGCATATCTTGCAGCTGGTTCTGTTGTAGAGGTGGCGGAGAGAGTTGCCAAAGGAGAGCTAGACTCTGGCTTTGCTATTGTCAGGCCTCCAGGTCACCATGCTGAGGCAGATGAAGCCATGGGGTTCTGTTTTTTCAACAATGTTGCAGTCGCTGCTAGTTATCTACTAGATGAAAGACCTGATCTAGGTGTCAAGAAGATTCTGGTTGTTGATTGGGATGTCCATCACGGAAACGGCACGCAGAAGATGTTCTGGGAAGATCCTCGTGTGCTAGTTTTCTCTGTTCATAGGCGTGAGGATGGAGGCTTCTATCCAGGGGGTGAGGATGGATCATATAACATGGTTGGTGAAGGTCCAGGTGAAGGGTTCAACATAAACGTCCCATGGGAGCAAGGAAGATGTGGAGATGCAGATTATCTTGCTGCTTGGGACCATATCTTGATTCCTGTGGCTAAGGAGTTTAATCCTGATATTATCTTGTTATCAGCTGGCTTTGATGCAGCTATTGGTGATCCACTTGGTGGTTGTCGTGTTACACCATATGGATATTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCACAAGGAAAGATTGTGATGGCATTAGAGGGAGGTTACAATCTTGACTCAATTGCAAAGTCTTCACTTGCATGTGTCCAAGTTTTGCTTGAAGACAACCCAATTCAAGGTTCTTCTGAAGAAATACCATTCATGTCCACATGGCGTGTTATACAAGCTGTACGCAAGAGGCTATGTGCTTATTGGCCTTCACTTGCAGATGAACTATCATCAAAGCTGATTAATCAGAAAACTCCTACTCCAATCGTCCTTACCTCAAACTCCAACTCTGAAGCTAAAGACAACGCTCATGAACTCCTGGATCAACTGTCAAAACTCAACATTGAAACACACAAAGTAGATACTAAGGTTTCTACATCTTGGAGAAGTGATCTCTCAAAAGTTGACGTCTGGTATGCCTCTTTCGGATCCAACATGTGGAAACCAAGGTTCCTTTGCTATATTCAAGGGGGACAAGTGGAGGGAATGACAAAGCCGTGTGTTGGTTCATTGGATAAAAGTCCACCAAAGGGAATAACGTGGGGAACATATCCAAACAGGTTATTCTTTGGCCGCGAATCTACAAATGTTTGGGGTAAAGGAGGTGTTGCTTTCACCAATCCCCTTACTAGTCCCAATGATCAAACTCACATGTGTCTGTATAGAATCACTCTTGAGCAGTTCAACGATGTTCTGTTTCAGGAAAATGGCTTGAACGTTGATTTTGCTTCTCCAATCTTTGGCCTTACTGCTCTGCAGTTAGTAGAGAAGAATGGATCCACTCCACTTGAAGCTGATTTGGCTCCTTGGTATGGAAACGTTGTCTGTTTGGGAAGAGAAGGCGACGTACCTATACTTACAATGACTTGCACACTTTCTGTTATTGAGAAGTTCGCTTCTGGTGAAGTGCCATTAAGTCCTCCTGCAAAAGCCTATGCCAACACTTTGATAAGGGGACTTGTTGAAGGAGGAATATTCTCTGAAGAAGAAGCTGAAGCTTACATAGACGATGCTGCTTCTAAGCCTCTCTATATCAATGGAGCTTCACGTTTCTGA |
| Protein: MNMAGKTSVNGESNGKVHRKVGLVYDETMCKHDTPHGEAHPERPDRIRVIWENLQLAGVTQRCVVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSDRVASLVNSIYLNGSTSEAAYLAAGSVVEVAERVAKGELDSGFAIVRPPGHHAEADEAMGFCFFNNVAVAASYLLDERPDLGVKKILVVDWDVHHGNGTQKMFWEDPRVLVFSVHRREDGGFYPGGEDGSYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKKLMEFAQGKIVMALEGGYNLDSIAKSSLACVQVLLEDNPIQGSSEEIPFMSTWRVIQAVRKRLCAYWPSLADELSSKLINQKTPTPIVLTSNSNSEAKDNAHELLDQLSKLNIETHKVDTKVSTSWRSDLSKVDVWYASFGSNMWKPRFLCYIQGGQVEGMTKPCVGSLDKSPPKGITWGTYPNRLFFGRESTNVWGKGGVAFTNPLTSPNDQTHMCLYRITLEQFNDVLFQENGLNVDFASPIFGLTALQLVEKNGSTPLEADLAPWYGNVVCLGREGDVPILTMTCTLSVIEKFASGEVPLSPPAKAYANTLIRGLVEGGIFSEEEAEAYIDDAASKPLYINGASRF |